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    Tissue biopsy FFPE preparation

    Kyu Sang Han, Pei-Hsun Wu

    Published: 2023-07-05 DOI: 10.17504/protocols.io.rm7vzx81rgx1/v1
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    Abstract

    Creating human tissue FFPE block from excisional biopsy, and sectioning to create H&E slides.

    Steps

    Tissue biopsy collection

    1.

    Take excisional biopsy of human skin in abdomen or scalp

    2.

    After excisional biopsy from a operating room (OR), place the skin tissue into a tissue container prefilled with buffered formalin for 12-24 hours at room temperature (RT)

    3.

    Discard formalin, rinse with PBS, refill PBS, and leave the tissue in PBS for 1 minute

    4.

    Take tissue out on a large Petri dish and measure the tissue size

    5.

    Label a slotted cassette with a pencil with tissue ID and place the tissue in the cassette

    6.

    Put cassette with the tissue back into the tissue container filled with PBS

    Paraffin Embedding

    7.

    Dehydrate tissue by submerging cassettes into ethanol at increasing concentrations from 70% to 99%.

    8.

    Embed cassette paraffin at 60 deg C and store at room temperature

    FFPE sectioning

    9.

    Section tissue and place on water bath to expand

    10.

    Place expanded tissue section on a Superfrost Plus microscope slide

    H&E stain

    11.

    Stain with Hematoxylin and Eosin

    12.

    Place coverslip

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